Well, they did increase Heatseeker Missle's Damage and boosted the proc rate for the instant Unload refresh (name escapes me at the moment).
I would say take Power Shot off your hotbar, unless someone else has had more success with it than I have. Tracer Missle becomes your spam ability to keep the debuff up, and use Heatseeker, Unload, and Rail Shot whenever they aren't on cooldown.
Doing this I haven't noticed too drastic of a drop in my dps. It focuses on the high damage abilities and keeps the armor debuff up to make them that much stronger.
This comes from a level 43 though, so if someone at 50 has better advice, follow it over mine.