Please for the love all that is holy or unholy fix this!
Please stop the returning crew member from overriding your current actions and windows. This has been plaguing players for 3 months now. It is unnecessary and extremely annoying.
SOLUTION!
When a crew member returns, a simple Pending notification in the upper right corner is fine; maybe even have the option (player controlled option) to allow the companion to verbally note mission complete.
Thank You
DarkCondor